Domain and Homology Block Prediction


Submit your protein sequences for prediction of PfEMP1 domains and homology blocks.

Paste a single sequence or several sequences in FASTA format into the field below:

Submit a file in FASTA format directly from your local disk:

Lower bit-score threshold for homology blocks   
(default is gathering cut-off = 9.97)

Restrictions:
At most 2000 sequences per submission; each sequence not more than 10,000 amino acids.
Total number of amino acids can not exceed 400,000.

Confidentiality:
The sequences are kept confidential and will be deleted after processing.


CITATIONS

For publication of results, please cite:

Plasmodium falciparum erythrocyte membrane protein 1 diversity in seven genomes - divide and conquer
Rask TS, Hansen DA, Theander TG, Gorm Pedersen A, Lavstsen T
PLoS Computational Biology 2010 Sep;6(9). pii: e1000933. link