By default the DNA alignment will be in ALN (Clustal) format. The user may select FASTA or MSF instead. The full alignment is shown in the browser window and is also available for download via a link at the top of the page (click on the floppy icon).

In the event of errors and warnings these will be shown at the top of the result page.

New in RevTrans 1.3: the case of the individual letters in the amino acid alignments is now carried over to the DNA alignment. Dialign2 marks amino acids considered to be fully aligned with UPPERCASE and uses lowercase to mark less well aligned regions.