MHC class I data format

Peptide HLA [Genotype] [Binding core]

where Genotype and Binding core are optional. If the binding core column is not included, make sure to check the option named 'MHC class I - No binding core column'.

Example allele name: HLA-A02:01

MHC class II data format

Peptide HLA [Genotype] [Binding core]

where Genotype and Binding core are optional. If the binding core column is not included, make sure to check the option named 'MHC class II - No binding core column'.

Example allele name: DRB1_0301

Allele frequencies data format

HLA Locus MHC_class Frequency

where HLA is the allele name, Locus is the allele's locus, MHC_class is either 1 or 2, and Frequency is the allelic frequency.
Make sure that the allele names in your allele frequency input are written the same way as in your HLA binder input data.

Example line: HLA-A02:01 HLA-A 1 0.143

Protein sequence data format

You can upload protein sequences either in FASTA format:

>Header
Sequence
⋮

Or simply with one protein sequence per line (no headers):

Sequence
Sequence
⋮