# For publication of results, please cite: # A generic method for assignment of reliability scores applied to solvent accessibility predictions. # Bent Petersen, Thomas Nordahl Petersen, Pernille Andersen, Morten Nielsen and Claus Lundegaard # BMC Structural Biology 2009, 9:51 doi:10.1186/1472-6807-9-51 # # Column 1: Class assignment - B for buried or E for Exposed - Threshold: 25% exposure, but not based on RSA # Column 2: Amino acid # Column 3: Sequence name # Column 4: Amino acid number # Column 5: Relative Surface Accessibility - RSA # Column 6: Absolute Surface Accessibility # Column 7: Z-fit score for RSA prediction # Column 8: Probability for Alpha-Helix # Column 9: Probability for Beta-strand # Column 10: Probability for Coil E A 2WNS.A.1 1 0.777 85.680 1.547 0.003 0.003 0.994 E L 2WNS.A.1 2 0.281 51.451 0.503 0.802 0.014 0.185 E G 2WNS.A.1 3 0.530 41.687 1.558 0.938 0.007 0.055 E P 2WNS.A.1 4 0.549 77.846 2.101 0.938 0.007 0.055 B L 2WNS.A.1 5 0.074 13.531 0.513 0.938 0.007 0.055 B V 2WNS.A.1 6 0.068 10.405 1.064 0.975 0.003 0.022 E T 2WNS.A.1 7 0.538 74.662 2.087 0.975 0.003 0.022 E G 2WNS.A.1 8 0.296 23.335 2.326 0.970 0.001 0.030 B L 2WNS.A.1 9 0.029 5.310 0.164 0.970 0.001 0.030 E Y 2WNS.A.1 10 0.326 69.581 1.270 0.923 0.002 0.076 E D 2WNS.A.1 11 0.764 110.107 1.486 0.782 0.003 0.216 B V 2WNS.A.1 12 0.217 33.307 1.603 0.321 0.003 0.675 E Q 2WNS.A.1 13 0.563 100.516 0.817 0.018 0.019 0.964 B A 2WNS.A.1 14 0.058 6.348 0.220 0.018 0.088 0.893 B F 2WNS.A.1 15 0.088 17.662 0.307 0.022 0.552 0.426 E K 2WNS.A.1 16 0.370 76.150 0.997 0.022 0.552 0.426 E F 2WNS.A.1 17 0.454 91.178 0.204 0.021 0.451 0.528 E G 2WNS.A.1 18 0.387 30.481 -0.578 0.019 0.141 0.840 E D 2WNS.A.1 19 0.574 82.742 0.151 0.019 0.141 0.840 B F 2WNS.A.1 20 0.126 25.288 0.725 0.021 0.756 0.223 E V 2WNS.A.1 21 0.393 60.373 0.761 0.018 0.846 0.136 B L 2WNS.A.1 22 0.155 28.289 0.530 0.018 0.846 0.136 E K 2WNS.A.1 23 0.502 103.323 0.020 0.022 0.552 0.426 B S 2WNS.A.1 24 0.319 37.352 -1.215 0.020 0.205 0.775 E G 2WNS.A.1 25 0.502 39.500 -1.743 0.019 0.141 0.840 E L 2WNS.A.1 26 0.384 70.237 -0.338 0.021 0.279 0.699 E S 2WNS.A.1 27 0.449 52.658 -0.193 0.021 0.451 0.528 B S 2WNS.A.1 28 0.158 18.564 -0.225 0.022 0.359 0.619 E P 2WNS.A.1 29 0.452 64.110 -0.834 0.021 0.279 0.699 B I 2WNS.A.1 30 0.232 42.883 0.867 0.023 0.655 0.322 B Y 2WNS.A.1 31 0.115 24.554 0.056 0.021 0.756 0.223 B I 2WNS.A.1 32 0.163 30.155 1.405 0.021 0.756 0.223 B D 2WNS.A.1 33 0.170 24.439 -1.081 0.074 0.484 0.442 B L 2WNS.A.1 34 0.127 23.180 0.923 0.118 0.150 0.732 E R 2WNS.A.1 35 0.377 86.425 0.324 0.278 0.093 0.628 E G 2WNS.A.1 36 0.367 28.883 0.146 0.354 0.048 0.598 B I 2WNS.A.1 37 0.099 18.389 -0.147 0.354 0.048 0.598 B V 2WNS.A.1 38 0.204 31.293 -1.012 0.257 0.016 0.727 E S 2WNS.A.1 39 0.511 59.831 -0.779 0.058 0.017 0.925 B R 2WNS.A.1 40 0.270 61.807 0.663 0.058 0.017 0.925 B P 2WNS.A.1 41 0.212 30.140 -0.022 0.923 0.002 0.076 E R 2WNS.A.1 42 0.603 138.133 1.212 0.970 0.001 0.030 B L 2WNS.A.1 43 0.095 17.340 0.474 0.970 0.001 0.030 B L 2WNS.A.1 44 0.036 6.518 0.464 0.970 0.001 0.030 E S 2WNS.A.1 45 0.352 41.219 1.396 0.970 0.001 0.030 E Q 2WNS.A.1 46 0.301 53.776 1.768 0.970 0.001 0.030 B V 2WNS.A.1 47 0.020 3.105 1.269 0.970 0.001 0.030 B A 2WNS.A.1 48 0.026 2.898 0.818 0.970 0.001 0.030 E D 2WNS.A.1 49 0.440 63.462 1.892 0.970 0.001 0.030 B I 2WNS.A.1 50 0.165 30.451 1.468 0.970 0.001 0.030 B L 2WNS.A.1 51 0.021 3.790 1.276 0.970 0.001 0.030 B F 2WNS.A.1 52 0.072 14.430 0.645 0.970 0.001 0.030 E Q 2WNS.A.1 53 0.585 104.463 1.979 0.970 0.001 0.030 B T 2WNS.A.1 54 0.179 24.786 1.814 0.970 0.001 0.030 B A 2WNS.A.1 55 0.030 3.284 0.243 0.970 0.001 0.030 E Q 2WNS.A.1 56 0.511 91.318 1.607 0.923 0.002 0.076 E N 2WNS.A.1 57 0.836 122.376 0.971 0.782 0.003 0.216 E A 2WNS.A.1 58 0.422 46.493 0.522 0.321 0.003 0.675 E G 2WNS.A.1 59 0.667 52.501 -1.111 0.016 0.005 0.979 B I 2WNS.A.1 60 0.173 32.060 0.007 0.003 0.003 0.994 E S 2WNS.A.1 61 0.636 74.551 1.229 0.005 0.045 0.951 B F 2WNS.A.1 62 0.086 17.320 1.054 0.004 0.197 0.799 E D 2WNS.A.1 63 0.309 44.556 0.085 0.004 0.514 0.481 B T 2WNS.A.1 64 0.074 10.278 0.703 0.001 0.959 0.040 B V 2WNS.A.1 65 0.018 2.720 0.753 0.001 0.959 0.040 B C 2WNS.A.1 66 0.023 3.159 1.210 0.001 0.959 0.040 B G 2WNS.A.1 67 0.037 2.880 -0.003 0.004 0.616 0.381 B V 2WNS.A.1 68 0.054 8.346 1.111 0.005 0.336 0.660 E P 2WNS.A.1 69 0.282 40.087 0.666 0.018 0.088 0.893 E Y 2WNS.A.1 70 0.300 64.003 -0.940 0.115 0.016 0.868 E T 2WNS.A.1 71 0.350 48.600 -1.088 0.176 0.004 0.820 B A 2WNS.A.1 72 0.082 9.003 -2.119 0.321 0.003 0.675 B L 2WNS.A.1 73 0.111 20.361 0.710 0.802 0.014 0.185 B P 2WNS.A.1 74 0.182 25.868 0.084 0.879 0.010 0.111 B L 2WNS.A.1 75 0.104 19.061 0.708 0.938 0.007 0.055 B A 2WNS.A.1 76 0.018 2.006 0.770 0.975 0.003 0.022 B T 2WNS.A.1 77 0.136 18.905 0.910 0.970 0.001 0.030 B V 2WNS.A.1 78 0.151 23.147 -0.019 0.970 0.001 0.030 B I 2WNS.A.1 79 0.041 7.622 0.643 0.988 0.000 0.012 B C 2WNS.A.1 80 0.019 2.640 0.490 0.970 0.001 0.030 E S 2WNS.A.1 81 0.413 48.357 1.221 0.970 0.001 0.030 E T 2WNS.A.1 82 0.431 59.835 0.411 0.923 0.002 0.076 B N 2WNS.A.1 83 0.175 25.664 0.553 0.600 0.003 0.397 E Q 2WNS.A.1 84 0.850 151.774 -0.347 0.016 0.005 0.979 B I 2WNS.A.1 85 0.089 16.410 0.916 0.005 0.015 0.979 E P 2WNS.A.1 86 0.336 47.664 -0.069 0.004 0.138 0.858 B M 2WNS.A.1 87 0.043 8.504 0.261 0.001 0.900 0.099 B L 2WNS.A.1 88 0.034 6.207 0.142 0.001 0.959 0.040 B I 2WNS.A.1 89 0.059 10.878 0.533 0.001 0.959 0.040 B R 2WNS.A.1 90 0.042 9.641 -0.492 0.001 0.900 0.099 B R 2WNS.A.1 91 0.189 43.327 1.011 0.003 0.718 0.279 E K 2WNS.A.1 92 0.320 65.865 0.874 0.004 0.420 0.576 E E 2WNS.A.1 93 0.658 114.918 1.306 0.019 0.141 0.840 E T 2WNS.A.1 94 0.696 96.535 -0.161 0.018 0.047 0.935 E K 2WNS.A.1 95 0.583 119.944 -0.149 0.018 0.088 0.893 E D 2WNS.A.1 96 0.676 97.484 -0.016 0.020 0.205 0.775 E Y 2WNS.A.1 97 0.362 77.274 -0.164 0.021 0.279 0.699 E G 2WNS.A.1 98 0.371 29.229 -1.731 0.022 0.359 0.619 E T 2WNS.A.1 99 0.459 63.663 -0.194 0.021 0.451 0.528 E K 2WNS.A.1 100 0.449 92.400 -0.525 0.021 0.451 0.528 E R 2WNS.A.1 101 0.379 86.699 0.195 0.023 0.655 0.322 B L 2WNS.A.1 102 0.299 54.802 -0.403 0.018 0.846 0.136 B V 2WNS.A.1 103 0.276 42.452 -0.197 0.018 0.846 0.136 E E 2WNS.A.1 104 0.462 80.676 -0.505 0.021 0.756 0.223 E G 2WNS.A.1 105 0.366 28.788 -1.166 0.022 0.552 0.426 E T 2WNS.A.1 106 0.448 62.110 -0.623 0.022 0.359 0.619 B I 2WNS.A.1 107 0.186 34.392 -0.535 0.020 0.205 0.775 E N 2WNS.A.1 108 0.488 71.458 0.676 0.018 0.088 0.893 E P 2WNS.A.1 109 0.663 94.136 0.880 0.018 0.019 0.964 E G 2WNS.A.1 110 0.579 45.599 -0.767 0.003 0.003 0.994 E E 2WNS.A.1 111 0.357 62.350 1.696 0.005 0.045 0.951 E T 2WNS.A.1 112 0.322 44.620 1.838 0.004 0.616 0.381 B C 2WNS.A.1 113 0.023 3.271 1.424 0.001 0.900 0.099 B L 2WNS.A.1 114 0.024 4.321 1.613 0.006 0.962 0.032 B I 2WNS.A.1 115 0.030 5.642 1.224 0.006 0.962 0.032 B I 2WNS.A.1 116 0.026 4.755 1.277 0.011 0.918 0.071 B E 2WNS.A.1 117 0.075 13.033 0.441 0.169 0.612 0.219 B D 2WNS.A.1 118 0.090 12.926 -0.382 0.352 0.332 0.316 B V 2WNS.A.1 119 0.074 11.328 0.571 0.478 0.309 0.214 B V 2WNS.A.1 120 0.081 12.404 0.647 0.538 0.173 0.289 E T 2WNS.A.1 121 0.308 42.761 0.104 0.455 0.046 0.498 B S 2WNS.A.1 122 0.216 25.315 0.268 0.181 0.016 0.803 B G 2WNS.A.1 123 0.178 14.009 -1.613 0.406 0.004 0.590 E S 2WNS.A.1 124 0.357 41.899 0.250 0.858 0.002 0.139 B S 2WNS.A.1 125 0.127 14.931 0.355 0.970 0.001 0.030 B V 2WNS.A.1 126 0.033 5.103 0.136 0.970 0.001 0.030 E L 2WNS.A.1 127 0.300 54.930 1.469 0.988 0.000 0.012 E E 2WNS.A.1 128 0.280 48.864 1.413 0.970 0.001 0.030 B T 2WNS.A.1 129 0.016 2.247 1.090 0.970 0.001 0.030 B V 2WNS.A.1 130 0.067 10.298 0.451 0.970 0.001 0.030 E E 2WNS.A.1 131 0.531 92.766 2.086 0.988 0.000 0.012 B V 2WNS.A.1 132 0.091 14.033 1.432 0.988 0.000 0.012 B L 2WNS.A.1 133 0.018 3.351 1.132 0.970 0.001 0.030 E Q 2WNS.A.1 134 0.532 94.997 1.970 0.970 0.001 0.030 E K 2WNS.A.1 135 0.738 151.807 1.738 0.858 0.002 0.139 B E 2WNS.A.1 136 0.224 39.115 1.166 0.246 0.004 0.750 E G 2WNS.A.1 137 0.737 58.010 0.770 0.003 0.003 0.994 B L 2WNS.A.1 138 0.074 13.604 -0.358 0.005 0.015 0.979 E K 2WNS.A.1 139 0.548 112.682 1.950 0.004 0.514 0.481 B V 2WNS.A.1 140 0.136 20.872 1.493 0.001 0.959 0.040 B T 2WNS.A.1 141 0.170 23.634 1.173 0.001 0.959 0.040 B D 2WNS.A.1 142 0.118 16.989 0.828 0.001 0.959 0.040 B A 2WNS.A.1 143 0.026 2.821 0.855 0.000 0.983 0.017 B I 2WNS.A.1 144 0.025 4.588 0.960 0.000 0.983 0.017 B V 2WNS.A.1 145 0.020 3.074 1.494 0.000 0.983 0.017 B L 2WNS.A.1 146 0.023 4.266 1.283 0.000 0.983 0.017 B L 2WNS.A.1 147 0.030 5.401 0.830 0.001 0.959 0.040 B D 2WNS.A.1 148 0.125 17.940 0.293 0.002 0.816 0.182 E R 2WNS.A.1 149 0.251 57.548 1.003 0.004 0.197 0.799 E E 2WNS.A.1 150 0.440 76.938 -0.160 0.018 0.047 0.935 E Q 2WNS.A.1 151 0.521 92.979 0.330 0.058 0.017 0.925 E G 2WNS.A.1 152 0.600 47.228 -0.105 0.115 0.016 0.868 B G 2WNS.A.1 153 0.107 8.421 -0.968 0.522 0.016 0.462 E K 2WNS.A.1 154 0.451 92.771 1.183 0.717 0.014 0.269 E D 2WNS.A.1 155 0.631 90.927 1.359 0.802 0.014 0.185 E K 2WNS.A.1 156 0.266 54.716 1.505 0.802 0.014 0.185 B L 2WNS.A.1 157 0.084 15.307 0.078 0.802 0.014 0.185 E Q 2WNS.A.1 158 0.668 119.216 1.422 0.802 0.014 0.185 E A 2WNS.A.1 159 0.746 82.264 0.879 0.600 0.003 0.397 E H 2WNS.A.1 160 0.409 74.379 0.821 0.176 0.004 0.820 E G 2WNS.A.1 161 0.785 61.787 0.218 0.003 0.003 0.994 B I 2WNS.A.1 162 0.076 14.079 0.879 0.005 0.045 0.951 E R 2WNS.A.1 163 0.452 103.508 1.409 0.005 0.262 0.733 B L 2WNS.A.1 164 0.065 11.828 0.672 0.021 0.756 0.223 B H 2WNS.A.1 165 0.243 44.238 1.455 0.011 0.918 0.071 B S 2WNS.A.1 166 0.068 7.958 0.001 0.011 0.918 0.071 B V 2WNS.A.1 167 0.048 7.439 -0.173 0.018 0.846 0.136 B C 2WNS.A.1 168 0.058 8.087 0.981 0.021 0.756 0.223 E T 2WNS.A.1 169 0.346 47.949 1.675 0.003 0.718 0.279 B L 2WNS.A.1 170 0.056 10.217 1.000 0.453 0.248 0.299 E S 2WNS.A.1 171 0.522 61.237 0.956 0.717 0.014 0.269 E K 2WNS.A.1 172 0.405 83.391 1.778 0.717 0.014 0.269 B M 2WNS.A.1 173 0.033 6.563 0.438 0.879 0.010 0.111 B L 2WNS.A.1 174 0.121 22.064 1.180 0.938 0.007 0.055 E E 2WNS.A.1 175 0.580 101.291 1.704 0.970 0.001 0.030 B I 2WNS.A.1 176 0.170 31.505 1.032 0.970 0.001 0.030 B L 2WNS.A.1 177 0.036 6.592 -0.837 0.970 0.001 0.030 E E 2WNS.A.1 178 0.536 93.692 1.427 0.923 0.002 0.076 E Q 2WNS.A.1 179 0.856 152.882 1.365 0.858 0.002 0.139 E Q 2WNS.A.1 180 0.457 81.674 1.388 0.246 0.004 0.750 E K 2WNS.A.1 181 0.602 123.790 -0.107 0.016 0.005 0.979 E K 2WNS.A.1 182 0.545 112.086 1.328 0.018 0.019 0.964 B V 2WNS.A.1 183 0.074 11.374 -0.259 0.018 0.019 0.964 E D 2WNS.A.1 184 0.447 64.384 1.394 0.018 0.019 0.964 E A 2WNS.A.1 185 0.691 76.192 1.387 0.923 0.002 0.076 E E 2WNS.A.1 186 0.729 127.409 1.262 0.858 0.002 0.139 B T 2WNS.A.1 187 0.219 30.389 0.792 0.858 0.002 0.139 B V 2WNS.A.1 188 0.121 18.659 1.241 0.970 0.001 0.030 E G 2WNS.A.1 189 0.669 52.682 1.838 0.970 0.001 0.030 E R 2WNS.A.1 190 0.345 79.074 2.359 0.970 0.001 0.030 B V 2WNS.A.1 191 0.029 4.457 0.484 0.970 0.001 0.030 E K 2WNS.A.1 192 0.443 91.146 1.977 0.970 0.001 0.030 E R 2WNS.A.1 193 0.566 129.568 2.122 0.923 0.002 0.076 B F 2WNS.A.1 194 0.132 26.472 0.674 0.923 0.002 0.076 E I 2WNS.A.1 195 0.339 62.807 0.927 0.782 0.003 0.216 E Q 2WNS.A.1 196 0.776 138.540 1.328 0.502 0.002 0.495 E E 2WNS.A.1 197 0.931 162.576 1.532 0.016 0.005 0.979