Paste a single sequence or several sequences in FASTA format into the field below:

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Organism   Aeropyrum pernix Agrobacterium tumefaciens str. C58 Aquifex aeolicus Archaeoglobus fulgidus DSM 4304 Bacillus anthracis str. Ames Bacillus cereus ATCC 10987 Bacillus halodurans Burkholderia pseudomallei K96243 Bacillus subtilis Bacteroides thetaiotaomicron VPI-5482 Bdellovibrio bacteriovorus Bifidobacterium longum NCC2705 Bordetella bronchiseptica Bordetella parapertussis Bordetella pertussis Bradyrhizobium japonicum Brucella melitensis Brucella suis 1330 Buchnera aphidicola Campylobacter jejuni Candidatus Blochmannia floridanus Caulobacter crescentus CB15 Chlamydia muridarum Chlamydia pneumoniae AR39 Chlamydia trachomatis Chlamydophila caviae GPIC Chlorobium tepidum TLS Chromobacterium violaceum ATCC 12472 Clostridium acetobutylicum ATCC824 Clostridium perfringens Clostridium tetani E88 Corynebacterium diphtheriae Corynebacterium efficiens YS-314 Corynebacterium glutamicum ATCC 13032 Coxiella burnetii RSA 493 Deinococcus radiodurans Enterococcus faecalis V583 Escherichia coli CFT073 Escherichia coli K12 Escherichia coli O157:H7 EDL933 Escherichia coli O157:H7 Fusobacterium nucleatum subsp. nucleatum ATCC 2558... Geobacter sulfurreducens PCA Gloeobacter violaceus Haemophilus ducreyi 35000HP Haemophilus influenzae Rd Haloarcula marismortui ATCC 43049 Halobacterium sp. NRC-1 Haloquadratum walsbyi DSM 16790 Helicobacter pylori 26695 Helicobacter pylori str. J99 Lactobacillus johnsonii NCC 533 Lactobacillus plantarum WCFS1 Lactococcus lactis subsp. lactis Leptospira interrogans serovar lai str. 56601 Listeria innocua Clip11262 Listeria monocytogenes EGD Mesorhizobium loti Methanobacterium thermoautotrophicum str. Delta H Methanococcoides burtonii DSM 6242 Methanococcus jannaschii Methanococcus maripaludis S2 Methanopyrus kandleri AV19 Methanosaeta thermophila PT Methanosarcina acetivorans str. C2A Methanosarcina barkeri str. fusaro Methanosarcina mazei Goe1 Methanosphaera stadtmanae DSM 3091 Methanospirillum hungatei JF-1 Mycobacterium avium subsp. paratuberculosis str. k... Mycobacterium bovis subsp. bovis AF2122/97 Mycobacterium tuberculosis CDC1551 Mycobacterium tuberculosis H23Rv Nanoarchaeum equitans Kin4-M Natronomonas pharaonis DSM 2160 Neisseria meningitidis serogroup A Z2491 Neisseria meningitidis serogroup B MC58 Nitrosomonas europaea Nostoc sp. PCC 7120 Oceanobacillus iheyensis HTE831 Onion yellows phytoplasma Pasteurella multocida Photorhabdus luminescens subsp. laumondii TTO1 Picrophilus torridus DSM 9790 Pirellula sp Porphyromonas gingivalis W83 Prochlorococcus marinus str. MIT 9313 Prochlorococcus marinus subsp marinus CCMP1375 Prochlorococcus marinus subsp. pastoris str. CCMP1... Pseudomonas aeruginosa PA01 Pseudomonas syringae pv. tomato str. DC3000 Pyrobaculum aerophilum Pyrobaculum islandicum DSM 4184 Pyrococcus abyssi Pyrococcus furiosus DSM 3638 Pyrococcus horikoshii Ralstonia solanacearum Rhodopseudomonas palustris CGA009 Rickettsia conorii Malish 7 Rickettsia prowazekii Madrid E Salmonella enterica subsp. enterica serovar Typhi ... Salmonella enterica subsp. enterica serovar Typhi ... Salmonella typhimurium LT2 Shewanella oneidensis MR-1 Sinorhizobium meliloti 1021 Staphylococcus aureus MU50 Staphylococcus aureus subsp aureus N315 Staphylococcus epidermidis ATCC 12228 Streptococcus agalactiae 2603V/R Streptococcus agalactiae NEM316 Streptococcus mutans UA159 Streptococcus pneumoniae Streptococcus pyogenes Streptomyces avermitilis MA-4680 Streptomyces coelicolor A3(2) Sulfolobus acidocaldarius DSM 639 Sulfolobus solfataricus Sulfolobus tokodaii Synechococcus sp. WH 8102 Synechocystis sp. PCC 6803 Thermoanaerobacter tengcongensis strain MB4T Thermococcus kodakarensis KOD1 Thermofilum pendens Hrk 5 Thermoplasma acidophilum Thermoplasma volcanium Thermosynechococcus elongatus BP-1 Thermotoga maritima Treponema denticola ATCC 35405 Treponema pallidum Tropheryma whipplei Twist Vibrio cholerae Vibrio parahaemolyticus RIMD 2210633 Vibrio vulnificus Wigglesworthia glossinidia endosymbiont of Glossin... Wolbachia endosymbiont of Drosophila melanogaster Xanthomonas axonopodis pv. citri str. 306 Xanthomonas campestris pv. campestris str. ATCC 33... Xylella fastidiosa Yersinia pestis

R-value cutoff                 Predict suboptimal gene starts

Restrictions
At most 10,000,000 nucleotides per submission in at most 50 sequences.
Confidentiality
The sequences are kept confidential and will be deleted after processing.

CITATIONS

For publication of results, please cite:

Large-scale prokaryotic gene prediction and comparison to genome annotation.
P. Nielsen and A. Krogh.
Bioinformatics: 21:4322-4329, 2005.

PMID: 16249266

EasyGene - a prokaryotic gene finder that ranks ORFs by statistical significance.
Thomas Schou Larsen and Anders Krogh.
BMC Bioinformatics: 4:21, 2003

PMID: 12783628         View the full article