DTU Health Tech

Department of Health Technology

Cancermuts - 1.0

Prioritization of missense cancer variants

Cancermuts is a package for the automatic retrieval and annotation of cancer mutations. At the moment it supports:

    Retrieval of protein sequence from UniProt
    Annotation of the sequence with data from
        cBioPortal - cancer mutations
        COSMIC - cancer mutations (after SNP filtering)
        ELM - linear motifs
        REVEL - pathogenicity prediction
        Phosphosite - post-translational modifications
        Manually curated annotations from csv files


GETTING HELP

If you need help regarding technical issues (e.g. errors or missing results) contact Technical Support. Please include the name of the service and version (e.g. NetPhos-4.0) and the options you have selected. If the error occurs after the job has started running, please include the JOB ID (the long code that you see while the job is running).

If you have scientific questions (e.g. how the method works or how to interpret results), contact Correspondence.

Correspondence: Technical Support: