MHCMotifDecon - 1.0

Motif deconvolution of multi-allele MSdata

MHCMotifDecon-1.0 is a supervised method for motif deconvolution of MS MHC peptidome data. The methods uses MHC binding predictions from NetMHCpan-4.1 (for MHC class I) and NetMHCIIpan-4.1 (for MHC class II) to deconvolute and assign likely MHC restriction elements to MS MHC peptidome data.

In the deconvolution, MS coimmunoprecipitated contaminants are identified a placed in a trash bin.

GETTING HELP